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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015800126.1_cds_XP_016468089.1_6032
CDS Infomation

[gene=LOC107790647] [db_xref=GeneID:107790647] [protein=shaggy-related protein kinase eta-like] [protein_id=XP_016468089.1] [location=join(5953..6099,6991..7083,7337..7396,7472..7744,7828..7902,8011..8067,8163..8303,8405..8455,8547..8642,8770..8853,9040..9141,10177..10272)] [gbkey=CDS]
Sequence

ATGGCCTCGTTACCGCTGGTACCTCAGCAGCACCATAATCCACCGGAAAATCTTCAGCAT
CAGCAGAATGCTCATCGTGACCAAGGAGCAGCAGCTGCCGTTAGGCCCGCCGTCGCCGGC
GTACCACCGGAAACGGATTCCGACAAGGAAATGTCAGCTGCCGTTGTTGAGGGTAATGGT
GCTGTCACTGGTCACATAATTTCCACCACAATTGGAGGCAAGAATGGGGAACCAAAAAGG
ACAATCAGTTACATGGCAGAGCGAGTTGTCGGTACAGGATCATTTGGAATAGTGTTTCAG
GCAAAATGCTTGGAAACTGGAGAGACCGTGGCCATAAAGAAGGTTTTGCAGGACAAACGG
TATAAAAATCGTGAACTACAGCTGATGCGCTTGATGGATCACCCAAATGTCATTTGTCTA
AAGCACTGCTTCTTTTCCACGACAAGTAGAGACGAGCTTTTCCTTAATTTGGTCATGGAT
TATGTCCCTGAAAGTTTATACAAGGTTTTAAGGCACTATAGCAATTCAAACCAAAGGATG
CCACTCATCTATGTCAAACCTTATATGTATCAGATATTCAGGGGGCTGGCTTACATTCAT
AATGTTCCAAGAATTTGCCATAGAGATGTGAAACCACAAAATCTTTTGGTTGATCCTCTG
ACCCATCAAGTCAAGCTTTGTGACTTTGGAAGTGCAAAAGTCCTGGTGAATGGTGAAGCA
AATATTTCATACATTTGCTCTCGCTACTACAGAGCTCCAGAACTCATATTTGGTGCCATA
GAATATACAACATCAATTGATATTTGGTCAGCGGGATGTGTTCTTGCTGAGCTTCTTCTG
GGGCAGCCGCTCTTTCCCGGCGAAAATGCTGTAGACCAACTTGTAGAGATTATCAAGGTC
CTTGGTACTCCTACTCGAGAAGAAATTCGATGTATGAACCCAAATTACACGGATTTCAGA
TTCCCACAGATAAAAGCTCATCCTTGGCACAAGGTATTCCATAAAAGAATGCCCCCTGAA
GCAATTGATCTTGCTTCACGGCTTCTCCAATATTCACCAAGTCTTCGCTGTACTGCGCTA
GAAGCGTGTGCTCATTCATTCTTTGATGAGCTTCGTGAGCCTAATGCCCGTCTCCCGAAT
GGACGTCCATTTCCACCTCTTTTCAACTTCAAACAGGAATTAACTGGAGCTTCACCTGAT
CTGGTATGCAAGCTGATCCCTGAGCATGTGTGGAGGCAAACTGGTTTGAATTTTCCCTAT
CCTGGTGCGACGTAA

Peptide Sequence

PEP ID

XP_016468089.1
PEP Infomation

PREDICTED: shaggy-related protein kinase eta-like [Nicotiana tabacum]
Sequence

MASLPLVPQQHHNPPENLQHQQNAHRDQGAAAAVRPAVAGVPPETDSDKEMSAAVVEGNG
AVTGHIISTTIGGKNGEPKRTISYMAERVVGTGSFGIVFQAKCLETGETVAIKKVLQDKR
YKNRELQLMRLMDHPNVICLKHCFFSTTSRDELFLNLVMDYVPESLYKVLRHYSNSNQRM
PLIYVKPYMYQIFRGLAYIHNVPRICHRDVKPQNLLVDPLTHQVKLCDFGSAKVLVNGEA
NISYICSRYYRAPELIFGAIEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKV
LGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTAL
EACAHSFFDELREPNARLPNGRPFPPLFNFKQELTGASPDLVCKLIPEHVWRQTGLNFPY
PGAT

Transcript Sequence

Gene sequence data has not been registered.